Protein Structure Prediction with Parallel Algorithms Orthogonal to Parallel Platforms
نویسندگان
چکیده
منابع مشابه
Architecture Framework for Mapping Parallel Algorithms to Parallel Computing Platforms
Mapping parallel algorithms to parallel computing platforms requires several activities such as the analysis of the parallel algorithm, the definition of the logical configuration of the platform, and the mapping of the algorithm to the logical configuration platform. Unfortunately, in current parallel computing approaches there does not seem to be precise modeling approaches for supporting the...
متن کاملMassively Parallel GAs for Protein Structure Prediction
Proteins play an important role in medicine, biology and chemistry. Very often the conformation of a given protein is of great interest. Genetic Algorithms have already been applied successfully in this eld. This paper examines the use of Massively Parallel Genetic Algorithms in combination with local search strategies and a simulated annealing approach to predict protein structures.
متن کاملa new type-ii fuzzy logic based controller for non-linear dynamical systems with application to 3-psp parallel robot
abstract type-ii fuzzy logic has shown its superiority over traditional fuzzy logic when dealing with uncertainty. type-ii fuzzy logic controllers are however newer and more promising approaches that have been recently applied to various fields due to their significant contribution especially when the noise (as an important instance of uncertainty) emerges. during the design of type- i fuz...
15 صفحه اولParallel Stochastic Search for Protein Secondary Structure Prediction
Prediction of the secondary structure of a protein from its aminoacid sequence remains an important and difficult task. Up to this moment, three generations of Protein Secondary Structure Algorithms have been defined: The first generation is based on statistical information over single aminoacids, the second generation is based on windows of aminoacids –typically 11-21 aminoacids– and the third...
متن کاملAdvances in Rosetta protein structure prediction on massively parallel systems
One of the key challenges in computational biology is prediction of three-dimensional protein structures from amino-acid sequences. For most proteins, the "native state" lies at the bottom of a free-energy landscape. Protein structure prediction involves varying the degrees of freedom of the protein in a constrained manner until it approaches its native state. In the Rosetta protein structure p...
متن کاملذخیره در منابع من
با ذخیره ی این منبع در منابع من، دسترسی به آن را برای استفاده های بعدی آسان تر کنید
ژورنال
عنوان ژورنال: Revista Eletrônica de Iniciação Científica em Computação
سال: 2019
ISSN: 1519-8219
DOI: 10.5753/reic.2019.1085